MACS3.Commands.refinepeak_cmd module

Description: refine peak summits

This code is free software; you can redistribute it and/or modify it under the terms of the BSD License (see the file LICENSE included with the distribution).

MACS3.Commands.refinepeak_cmd.find_summit(chrom, plus, minus, peak_start, peak_end, name=b'peak', window_size=100, cutoff=5)

MACS3.Commands.refinepeak_cmd.load_tag_files_options(options)

From the options, load alignment tags.

MACS3.Commands.refinepeak_cmd.run(o_options)

The Main function/pipeline for duplication filter.